Target APC100075

Local target id
>gnl|sha|ktc1LQX2opvlxyaqLSesBebWzJs|243365|243365.000|complement|2972354|2973301  
Stage
in_pdb   PDB:
Locus Tag/Selection DB Lookup
CV_2736  
NCBI Protein Lookup
gi: 34498191   accession: NP_902406  
Organism
Chromobacterium violaceum ATCC 12472  
Common Name
chitinase [Chromobacterium violaceum ATCC 12472]  
NCBI Gene Lookup
2547683  
NCBI Annotation
identified by sequence similarity; putative; ORF located using Blastx/COG3325  
Selection Phase
MCSG::Biology::Human Microbiome  
Date Approved
Oct 05, 2010  
Justification for Selection
Glycosyl hydrolases with unknown structure  
Priority
1  
Sequence Length
315  
(Subtargets)
 
Molecular Weight
33.8 kDa  
Sequence
MVLAYYSGYA GNYAALTRYA ASFNAVAVDF YNITAQGAVT GNGDPAPNDA ISFLLGRKIP AYGCVSNVDG NGNWSADIAH AVSTSAQSQA VANLVKFAQD KRFSGINVDF EAVAQGDRNN FSHFIQVLGR ALHAKGLKLI VSVPAFSAKD ENHPANYGYD LRALGAAADY LQIMSYDEAI PAWDPGPVAG SDWMEDDLDY AVERVPAAKI LNGIPAYGYD WKRPGDGGML YWKDTQALIA RYGAQPRYDA GTHSLTFNYG AADGSRHTVW TENARSVALK ASLVNAYGLG GTSLYALGME DDAFWAAVKQ GLAQR  
DNA Sequence
ATGGTT CTGGCT TATTAT TCCGGC TATGCC GGCAAT TACGCC GCGCTG ACCCGG TACGCC GCCAGC TTCAAT GCCGTC GCTGTC GACTTT TACAAC ATCACC GCCCAG GGCGCG GTGACG GGCAAC GGCGAT CCGGCG CCGAAC GACGCC ATCTCT TTCCTG CTCGGC AGGAAG ATTCCC GCCTAC GGCTGC GTGTCG AATGTC GACGGC AACGGC AATTGG AGCGCC GACATC GCCCAC GCGGTA TCGACC TCGGCG CAGAGC CAGGCG GTGGCC AACCTG GTGAAG TTCGCC CAGGAC AAGCGC TTCTCC GGCATC AACGTG GATTTC GAGGCG GTGGCG CAGGGC GACCGC AACAAC TTCAGC CACTTC ATCCAG GTTCTG GGCCGG GCATTG CACGCC AAGGGC CTGAAG CTGATC GTCAGC GTGCCG GCCTTT TCCGCC AAAGAC GAAAAC CATCCG GCCAAT TACGGC TACGAT CTGCGC GCCTTG GGCGCG GCGGCC GACTAC CTGCAG ATCATG AGCTAC GACGAG GCGATT CCGGCC TGGGAT CCGGGG CCGGTG GCCGGC TCGGAC TGGATG GAGGAT GACCTG GACTAT GCGGTG GAGCGG GTGCCG GCGGCC AAGATA CTGAAC GGCATT CCAGCC TACGGC TACGAT TGGAAG CGGCCT GGCGAC GGCGGC ATGCTG TACTGG AAGGAT ACGCAG GCCTTG ATCGCC CGCTAC GGCGCG CAGCCG CGCTAC GACGCC GGCACC CATTCC CTGACT TTCAAC TACGGC GCGGCC GATGGC AGCCGC CACACG GTGTGG ACCGAA AACGCG CGCAGC GTGGCG CTGAAG GCCAGC CTGGTG AACGCC TACGGC CTGGGC GGCACA TCCTTG TACGCG CTGGGG ATGGAG GATGAC GCGTTC TGGGCG GCGGTG AAACAG GGCCTG GCGCAG CGCTAG  
Community nominated
False  
Partnership nominated
 
Biomedical
True  
Metagenomic
True  
Structural coverage
True  
Psi 2
False