Target APC101566

Local target id
gi|267992822:01:190-349  
Stage
in_pdb   PDB:
Locus Tag/Selection DB Lookup
STM14_1214  
NCBI Protein Lookup
gi: 267992822   accession:  
Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S  
Common Name
outer membrane protein A [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S]  
Gene Name
ompA  
NCBI Annotation
OmpA is believed to be a porin, involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli, and it is known to play a role as a phage receptor, a mediator of F-factor dependent conjugation, and in maintaining the structural shape of the outer membrane; 3a; II*; G; d  
Selection Phase
CONS::PCSEP::Effectors  
Date Approved
Oct 05, 2010  
Justification for Selection
Salmonella secreted proteins identified via MS/MS  
Priority
9  
Sequence Length
350  
(Subtargets)
 
Molecular Weight
37.5 kDa  
Sequence
MKKTAIAIAV ALAGFATVAQ AAPKDNTWYA GAKLGWSQYH DTGFIHNDGP THENQLGAGA FGGYQVNPYV GFEMGYDWLG RMPYKGDNIN GAYKAQGVQL TAKLGYPITD DLDVYTRLGG MVWRADTKSN VPGGPSTKDH DTGVSPVFAG GIEYAITPEI ATRLEYQWTN NIGDANTIGT RPDNGLLSVG VSYRFGQQEA APVVAPAPAP APEVQTKHFT LKSDVLFNFN KSTLKPEGQQ ALDQLYSQLS NLDPKDGSVV VLGFTDRIGS DAYNQGLSEK RAQSVVDYLI SKGIPSDKIS ARGMGESNPV TGNTCDNVKP RAALIDCLAP DRRVEIEVKG VKDVVTQPQA  
DNA Sequence
ATGAAA AAGACA GCTATC GCGATT GCAGTG GCACTG GCTGGT TTCGCT ACCGTA GCGCAG GCCGCT CCGAAA GATAAC ACCTGG TACGCT GGTGCT AAACTG GGCTGG TCTCAG TACCAT GACACC GGCTTC ATTCAC AATGAT GGCCCG ACTCAT GAAAAC CAACTG GGCGCA GGTGCT TTTGGT GGTTAC CAGGTT AACCCG TATGTT GGCTTT GAAATG GGCTAC GACTGG TTAGGC CGTATG CCGTAC AAAGGC GACAAC ATCAAT GGCGCT TATAAA GCTCAG GGCGTT CAGTTG ACCGCT AAACTG GGTTAT CCAATC ACTGAC GATCTG GACGTT TATACC CGTCTG GGTGGT ATGGTA TGGCGT GCAGAC ACCAAG TCTAAC GTCCCT GGCGGC CCGTCT ACTAAA GACCAC GACACC GGCGTT TCCCCG GTATTC GCGGGC GGTATC GAGTAT GCTATC ACCCCT GAAATC GCAACC CGTCTG GAATAC CAGTGG ACTAAC AACATC GGTGAT GCCAAC ACCATC GGCACC CGTCCG GACAAC GGCCTG CTGAGC GTAGGT GTTTCC TACCGT TTCGGC CAGCAA GAAGCT GCTCCG GTAGTA GCTCCG GCACCA GCTCCG GCTCCG GAAGTA CAGACC AAGCAC TTCACT CTGAAG TCTGAC GTACTG TTCAAC TTCAAC AAATCT ACCCTG AAGCCG GAAGGC CAGCAG GCTCTG GATCAG CTGTAC AGCCAG CTGAGC AACCTG GATCCG AAAGAC GGTTCC GTTGTC GTTCTG GGCTTC ACTGAC CGTATC GGTTCT GACGCT TACAAC CAGGGT CTGTCC GAGAAA CGTGCT CAGTCT GTTGTT GATTAC CTGATC TCCAAA GGTATT CCGTCT GACAAA ATCTCC GCACGT GGTATG GGCGAA TCTAAC CCGGTT ACCGGC AACACC TGTGAC AACGTG AAACCT CGCGCT GCCCTG ATCGAT TGCCTG GCTCCG GATCGT CGCGTA GAGATC GAAGTT AAAGGC GTTAAA GACGTG GTAACT CAGCCG CAGGCT  
Community nominated
False  
Partnership nominated
PCSEP  
Biomedical
True  
Metagenomic
False  
Structural coverage
False  
Psi 2
False