Target APC108254

Local target id
OTH0027  
Stage
in_pdb   PDB:
NCBI Protein Lookup
gi: 19071504   accession:  
Organism
Pseudomonas syringae pv. maculicola  
Common Name
AF458050_1 type III effector HopPmaL [Pseudomonas syringae pv. maculicola]  
NCBI Annotation
similar to Pseudomonas syringae pv. phaseolicola VirPphA encoded by GenBank Accession Number AF141883  
Selection Phase
MCSG::Biology::Pathogens  
Date Approved
Oct 12, 2011  
Justification for Selection
PSI2 advanced targets  
Priority
1  
Sequence Length
385  
(Subtargets)
 
Molecular Weight
41.6 kDa  
Sequence
MVGISGRAGP SGSYNYSGHT DNPEPVSGRA RDSNSEANSS NSPQVPPPLN APASPMPAGR PRFLRSMALS SQTREWLEKG MPTEAEAGVP IRLQERAANT APQARAEERH TQPADAAAPH ARAERGRTLQ APASTSPLYT GAVPRANRIV QQLVEAGADL ANIRTMFRNM LRGEEMILSR AEQNVFLQHF PDMLPCGIDR NSELAIALRE ALRRADSQQA ARAPARTPPR SSVRTPERSP APRTATESSS GSNQRSLLGR FAGLMTSNQR RPSSASNAST SQRPVDRNPP RINLMPTGAN RVAMRNRGNN EADAALQALA QNGINMEDLR AALEAYIVWL RPIPLDIANA LEGVGITPRF DNPEEAKVDN PLMNLSSALK RRLDA  
DNA Sequence
ATGGTA GGGATC AGTGGT AGAGCA GGTCCA TCGGGT TCTTAC AATTAT AGTGGG CACACA GACAAC CCTGAA CCAGTA TCCGGG CGCGCA CGCGAT TCCAAC AGCGAA GCCAAC TCCTCG AACAGC CCGCAG GTGCCG CCCCCC TTGAAC GCGCCC GCATCT CCGATG CCAGCC GGACGT CCGAGG TTTTTG CGATCC ATGGCG TTGTCG AGCCAA ACCAGA GAGTGG CTGGAG AAGGGC ATGCCG ACAGAG GCGGAG GCTGGA GTGCCC ATCAGG TTGCAG GAGCGT GCCGCT AACACC GCGCCG CAGGCA CGTGCA GAGGAA AGACAT ACGCAA CCTGCC GATGCT GCGGCG CCACAT GCACGT GCAGAG AGAGGA CGCACG CTGCAG GCGCCT GCCAGT ACCTCT CCACTT TACACA GGTGCG GTGCCA CGCGCC AATAGA ATTGTT CAACAA TTGGTC GAAGCG GGCGCT GATCTT GCCAAT ATTCGC ACCATG TTCCGC AATATG TTGAGG GGCGAA GAGATG ATTCTT TCTCGA GCCGAA CAGAAT GTTTTT CTCCAG CATTTT CCTGAC ATGCTA CCTTGT GGAATT GATCGC AACTCA GAGCTT GCTATC GCGCTC CGTGAG GCGCTC CGTAGA GCGGAT AGCCAA CAGGCG GCGCGA GCGCCA GCAAGG ACACCA CCACGG TCCTCT GTCAGG ACGCCG GAGCGG TCGCCA GCGCCG CGCACC GCTACG GAATCA TCATCG GGTAGC AACCAG CGTTCA TTATTA GGCCGG TTCGCC GGGTTG ATGACG TCTAAT CAGAGA CGTCCG TCGAGC GCTTCG AACGCG TCTACC TCTCAA AGGCCA GTAGAC AGAAAC CCGCCA CGCATC AACTTG ATGCCC ACAGGC GCTAAC CGGGTT GCGATG CGTAAT CGTGGT AATAAC GAGGCC GACGCC GCGCTG CAGGCA TTGGCT CAAAAT GGGATC AACATG GAGGAC CTGCGC GCTGCG CTTGAA GCATAT ATAGTG TGGTTA CGCCCG ATCCCT CTGGAC ATAGCG AACGCG TTGGAG GGTGTG GGCATT ACCCCA AGATTT GACAAC CCAGAG GAGGCG AAAGTC GACAAC CCGCTG ATGAAT TTGAGT TCTGCG CTCAAG CGTCGG CTTGAT GCA  
Community nominated
False  
Partnership nominated
 
Biomedical
True  
Metagenomic
False  
Structural coverage
False  
Psi 2
False