Target APC108873

Local target id
Balat_0064  
Stage
in_pdb   PDB:
NCBI Protein Lookup
gi: 240250088   accession:  
Organism
Bifidobacterium animalis subsp. lactis DSM 10140  
Common Name
RbsR-type transcription regulator/ ribose operon  
Selection Phase
MCSG::Biology::Human Microbiome  
Date Approved
May 10, 2013  
Justification for Selection
Human gut transportome. Functional families differentially expressed in healthy individuals from different geographical locations.  
Priority
1  
Sequence Length
344  
(Subtargets)
 
Molecular Weight
37.7 kDa  
Sequence
MAKGVTIKDV AAEAGVSFKT VSNVINGTGS MRESTRGRVL EAMDKLNYTI NLSARSLKTG TTGLLGLAIF DFSQPFASYL ADQIIVCARE HHYGVIINTY GQNEHGLARA MRQANNLAAD GWIVFADHAM GQHSKMLDQS YPLVLTGDWD AYGKVDQVTM PNVEAMRYTT NRLLDSGYRS IALFGADGSL GARHYRQATE GTQELRVQGY MQAYEEHGIE ARMDMLFSGG LLTSDSGVRA TNLMMDQGVR PDAIICLNDA MALGALHQLQ VRGIRVPDDV QVVGFDNVPE ATYANPSLTT IDPHIDSYAR HAVDMLIERI QGYDGAKRVY TSDFTLVERS STSL  
DNA Sequence
ATGGCA AAAGGC GTGACC ATCAAG GATGTC GCGGCC GAGGCC GGCGTA TCGTTC AAAACA GTCTCG AACGTG ATCAAC GGCACC GGCAGC ATGCGT GAATCG ACACGT GGACGC GTGCTT GAGGCA ATGGAC AAGCTG AACTAC ACGATC AACCTG TCGGCA CGTTCA CTGAAA ACCGGC ACAACC GGGTTG CTCGGA TTGGCC ATCTTC GATTTC TCCCAG CCATTC GCCTCG TATCTG GCCGAT CAGATC ATCGTC TGCGCG CGGGAG CATCAT TACGGG GTCATC ATAAAC ACCTAC GGCCAG AATGAG CACGGC CTGGCA CGGGCG ATGCGG CAGGCG AACAAT CTGGCC GCAGAC GGGTGG ATCGTC TTCGCC GATCAT GCAATG GGACAA CACAGC AAGATG CTCGAC CAAAGC TATCCT CTGGTG CTCACC GGCGAC TGGGAC GCCTAT GGCAAG GTGGAT CAGGTC ACCATG CCGAAC GTGGAG GCGATG CGATAC ACCACC AATCGC CTGCTT GATTCC GGGTAC CGTTCC ATCGCG CTGTTC GGCGCA GACGGC TCGCTC GGCGCA AGACAT TACCGA CAAGCC ACCGAG GGTACG CAGGAA CTCCGC GTGCAA GGGTAT ATGCAG GCATAC GAGGAG CATGGC ATCGAG GCCCGC ATGGAC ATGCTG TTCTCA GGTGGC TTATTG ACGAGC GACAGC GGCGTT CGCGCA ACGAAT CTGATG ATGGAC CAAGGC GTGCGA CCGGAC GCCATC ATCTGT CTCAAT GACGCG ATGGCG CTGGGA GCGTTG CATCAA TTGCAG GTACGG GGAATC CGGGTG CCCGAC GATGTG CAGGTG GTGGGT TTCGAC AATGTA CCGGAG GCGACG TATGCG AACCCT TCCCTG ACGACA ATCGAC CCGCAT ATCGAC AGCTAT GCGCGG CACGCG GTGGAC ATGCTC ATCGAA CGCATT CAAGGG TACGAT GGCGCG AAACGC GTATAC ACATCC GATTTC ACCTTG GTGGAG CGCTCG TCAACC AGTCTA  
Community nominated
False  
Partnership nominated
 
Biomedical
False  
Metagenomic
True  
Structural coverage
False  
Psi 2
False